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13 Juli 2022 - 13:21
R convert 3 letter amino acid code to 1-letter code
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R convert 3 letter amino acid code to 1-letter code










r convert 3 letter amino acid code to 1-letter code

phiX174Phage: Versions of bacteriophage phiX174 complete genome and sample.

r convert 3 letter amino acid code to 1-letter code

  • PairwiseAlignments-io: Write a PairwiseAlignments object to a file.
  • PairwiseAlignments-class: PairwiseAlignments, PairwiseAlignmentsSingleSubject, and.
  • pairwiseAlignment: Optimal Pairwise Alignment.
  • nucleotideFrequency: Calculate the frequency of oligonucleotides in a DNA or RNA.
  • needwunsQS: (Deprecated) Needleman-Wunsch Global Alignment.
  • MultipleAlignment-class: MultipleAlignment objects.
  • match-utils: Utility functions operating on the matches returned by a.
  • matchPWM: PWM creating, matching, and related utilities.
  • matchprobes: A function to match a query sequence to the sequences of a.
  • matchProbePair: Find "theoretical amplicons" mapped to a probe pair.
  • matchPDict-inexact: Inexact matching with matchPDict()/countPDict()/whichPDict().
  • matchPDict-exact: Matching a dictionary of patterns against a reference.
  • matchPattern: String searching functions.
  • matchLRPatterns: Find paired matches in a sequence.
  • maskMotif: Masking by content (or by position).
  • MaskedXString-class: MaskedXString objects.
  • lowlevel-matching: Low-level matching functions.
  • longestConsecutive: Obtain the length of the longest substring containing only.
  • letterFrequency: Calculate the frequency of letters in a biological sequence.
  • IUPAC_CODE_MAP: The IUPAC Extended Genetic Alphabet.
  • injectHardMask: Injecting a hard mask in a sequence.
  • HNF4alpha: Known HNF4alpha binding sequences.
  • gregexpr2: A replacement for R standard gregexpr function.
  • GENETIC_CODE: The Standard Genetic Code and its known variants.
  • findPalindromes: Searching a sequence for palindromes.
  • dinucleotideFrequencyTest: Pearson's chi-squared Test and G-tests for String Position.
  • detail: Show (display) detailed object content.
  • chartr: Replace letters in a sequence or set of sequences.
  • Biostrings-internals: Biostrings internals.
  • AMINO_ACID_CODE: The Single-Letter Amino Acid Code.
  • align-utils: Utility functions related to sequence alignment.
  • AlignedXStringSet-class: AlignedXStringSet and QualityAlignedXStringSet objects.












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